Visualizing Pedigrees with 'ggplot2' and 'plotly'

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Documentation for package ‘ggpedigree’ version 1.1.0.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

ASOIAF	A pedigree of ice and fire
calculateConnections	Calculate connections for a pedigree dataset
calculateCoordinates	Calculate coordinates for plotting individuals in a pedigree
computeDistance	Compute distance between two points
countOffspring	Count offspring of each individual
countSiblings	Count siblings of each individual
generateSpouseList	Generate a spouselist matrix
getDefaultPlotConfig	Shared Default Plotting Configuration
ggPedigree	Plot a custom pedigree diagram
ggpedigree	Plot a custom pedigree diagram
ggPedigreeInteractive	Interactive pedigree plot (Plotly wrapper around ggPedigree)
ggPhenotypeByDegree	Plot correlation of genetic relatedness by phenotype
ggRelatednessMatrix	Plot a relatedness matrix as a heatmap (ggpedigree style)
kinship2_autohint	Automatically generate alignment hints for pedigree plotting
kinship2_plotPedigree	plotPedigree A wrapped function to plot simulated pedigree from function 'simulatePedigree'. This function require the installation of package 'kinship2'.
optimizePedigree	Optimize Pedigree Plot
optimizePlotlyPedigree	Optimize Plotly Pedigree Plot
pedigree	Create a pedigree or pedigreeList object
plotPedigree	plotPedigree A wrapped function to plot simulated pedigree from function 'simulatePedigree'. This function require the installation of package 'kinship2'.
print.pedigree	Create a pedigree or pedigreeList object
print.pedigreeList	Create a pedigree or pedigreeList object
redsquirrels	Kluane Red Squirrel Data
redsquirrels_full	Kluane Red Squirrel Data
warsofroses	Wars of the Roses Pedigree Data
[.pedigree	Create a pedigree or pedigreeList object
[.pedigreeList	Create a pedigree or pedigreeList object